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1

GROMOS96 43a1 performance on the characterization of glycoprotein conformational ensembles through molecular dynamics simulations

Laercio Pol-Fachin, Claudia Lemelle Fernandes, Hugo Verli

Journal:

Carbohydrate Research

Année:

2009

Langue:

english

Fichier:

PDF, 2.46 MB

english, 2009

2

GROMOS 53A6 GLYC , an Improved GROMOS Force Field for Hexopyranose-Based Carbohydrates

Pol-Fachin, Laercio, Rusu, Victor H., Verli, Hugo, Lins, Roberto D.

Journal:

Journal of Chemical Theory and Computation

Année:

2012

Langue:

english

Fichier:

PDF, 1.67 MB

english, 2012

3

Low Sugar Is Not Always Good: Impact of Specific O -Glycan Defects on Tip Growth in Arabidopsis

Velasquez, Silvia M., Marzol, Eliana, Borassi, Cecilia, Pol-Fachin, Laercio, Ricardi, Martiniano M., Mangano, Silvina, Juarez, Silvina Paola Denita, Salter, Juan D. Salgado, Dorosz, Javier Gloazzo, Ma

Journal:

PLANT PHYSIOLOGY

Année:

2015

Langue:

english

Fichier:

PDF, 3.29 MB

english, 2015

4

Polymyxin Binding to the Bacterial Outer Membrane Reveals Cation Displacement and Increasing Membrane Curvature in Susceptible but not in Resistant LPS Chemotypes

Santos, Denys Ewerton da Silva, Pol-Fachin, Laércio, Lins, Roberto D., Soares, Thereza A.

Journal:

Journal of Chemical Information and Modeling

Année:

2017

Langue:

english

Fichier:

PDF, 11.83 MB

english, 2017

5

Characterization of the conformational ensemble from bioactive N-acylhydrazone derivatives

Laercio Pol-Fachin, Carlos Alberto Massour Fraga, Eliezer J. Barreiro, Hugo Verli

Journal:

Journal of Molecular Graphics and Modelling

Année:

2010

Langue:

english

Fichier:

PDF, 668 KB

english, 2010

6

Effects of glycosylation on heparin binding and antithrombin activation by heparin

Laercio Pol-Fachin, Camila Franco Becker, Jorge Almeida Guimarães, Hugo Verli

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2011

Langue:

english

Fichier:

PDF, 1.22 MB

english, 2011

7

Depiction of the forces participating in the 2-O-sulfo-α-l-iduronic acid conformational preference in heparin sequences in aqueous solutions

Laercio Pol-Fachin, Hugo Verli

Journal:

Carbohydrate Research

Année:

2008

Langue:

english

Fichier:

PDF, 969 KB

english, 2008

8

Solution conformation and dynamics of exopolysaccharides from Burkholderia species

Laercio Pol-Fachin, Rodrigo V. Serrato, Hugo Verli

Journal:

Carbohydrate Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.65 MB

english, 2010

9

Effects of glycosylation and pH conditions in the dynamics of human arylsulfatase A

Virgens, Madza Yasodara Farias, Pol-Fachin, Laercio, Verli, Hugo, Saraiva-Pereira, Maria Luiza

Journal:

Journal of Biomolecular Structure and Dynamics

Année:

2014

Langue:

english

Fichier:

PDF, 1.64 MB

english, 2014

10

Unrestrained Conformational Characterization of Stenocereus eruca Saponins in Aqueous and Nonaqueous Solvents

Pedebos, Conrado, Pol-Fachin, Laercio, Verli, Hugo

Journal:

Journal of Natural Products

Année:

2012

Langue:

english

Fichier:

PDF, 2.13 MB

english, 2012

11

Extension and validation of the GROMOS 53A6 glyc parameter set for glycoproteins

Pol-Fachin, Laercio, Verli, Hugo, Lins, Roberto D.

Journal:

Journal of Computational Chemistry

Année:

2014

Langue:

english

Fichier:

PDF, 812 KB

english, 2014

12

Inhibition of the Hemolytic Activity caused by Staphylococcus aureus alpha-Hemolysin through Isatin-Schiff Copper(II) Complexes

Melo, Maria C. A., Teixeira, Luciana R., Pol-Fachin, Laercio, Rodrigues, Claudio G.

Journal:

FEMS Microbiology Letters

Année:

2015

Langue:

english

Fichier:

PDF, 446 KB

english, 2015

13

Glycosylation is crucial for a proper catalytic site organization in human glucocerebrosidase

Pol-Fachin, Laercio, Siebert, Marina, Verli, Hugo, Saraiva-Pereira, Maria Luiza

Journal:

Glycoconjugate Journal

Année:

2016

Langue:

english

Fichier:

PDF, 695 KB

english, 2016

14

Assessment of Glycoproteins Dynamics from Computer Simulations

Pol-Fachin, Laercio, Verli, Hugo

Journal:

Mini-Reviews in Organic Chemistry

Année:

2011

Langue:

english

Fichier:

PDF, 370 KB

english, 2011

15

Conformational stability of the epidermal growth factor (EGF) receptor as influenced by glycosylation, dimerization and EGF hormone binding

Taylor, Eric S., Pol-Fachin, Laercio, Lins, Roberto D., Lower, Steven K.

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2017

Langue:

english

Fichier:

PDF, 2.26 MB

english, 2017

16

Insights into the effects of glycosylation and the monosaccharide-binding activity of the plant lectin CrataBL

Pol-Fachin, Laercio

Journal:

Glycoconjugate Journal

Année:

2017

Langue:

english

Fichier:

PDF, 2.29 MB

english, 2017

17

Staphylococcus aureus δ-toxin in aqueous solution: Behavior in monomeric and multimeric states

Melo, Maria Carolina de Araujo, Rodrigues, Cláudio Gabriel, Pol-Fachin, Laercio

Journal:

Biophysical Chemistry

Année:

2017

Langue:

english

Fichier:

PDF, 1.27 MB

english, 2017

18

Cover Image, Volume 85, Issue 4

Taylor, Eric S., Pol-Fachin, Laercio, Lins, Roberto D., Lower, Steven K.

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2017

Fichier:

PDF, 2.30 MB

2017

19

Mapping Putative B-Cell Zika Virus NS1 Epitopes Provides Molecular Basis for Anti-NS1 Antibody Discrimination between Zika and Dengue Viruses

Freire, Marjorie C. L. C., Pol-Fachin, Laércio, Coêlho, Danilo F., Viana, Isabelle F. T., Magalhães, Tereza, Cordeiro, Marli T., Fischer, Nico, Loeffler, Felix F., Jaenisch, Thomas, Franca, Rafael F.,

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 3.15 MB

english, 2017

20

Insights into the N-Sulfation Mechanism: Molecular Dynamics Simulations of the N-Sulfotransferase Domain of Ndst1 and Mutants

Gesteira, Tarsis F., Pol-Fachin, Laércio, Coulson-Thomas, Vivien Jane, Lima, Marcelo A., Verli, Hugo, Nader, Helena B., Parker, Emily

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 2.16 MB

english, 2013

21

The Calcium Goes Meow: Effects of Ions and Glycosylation on Fel d 1, the Major Cat Allergen

Ligabue-Braun, Rodrigo, Sachett, Liana Guimarães, Pol-Fachin, Laércio, Verli, Hugo, Levy, Yaakov Koby

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 7.51 MB

english, 2015

22

Atomic Model and Micelle Dynamics of QS-21 Saponin

Pedebos, Conrado, Pol-Fachin, Laércio, Pons, Ramon, Teixeira, Cilâine, Verli, Hugo

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 2.29 MB

english, 2014

23

Duffy binding-like 1α adhesin from Plasmodium falciparum recognizes ABH histo-blood group saccharide in a type specific manner

Oliveira, Isadora A., Pol-Fachin, Laércio, de Carvalho, Sebastião T., Lins, Roberto D., Soares, Thereza A., Mohana-Borges, Ronaldo, Neves, Jorge L., Todeschini, Adriane R.

Journal:

Carbohydrate Polymers

Année:

2018

Langue:

english

Fichier:

PDF, 1.05 MB

english, 2018

24

Alpha-hemolysin nanopore allows discrimination of the microcystins variants

Júnior, Janilson J. S., Soares, Thereza A., Pol-Fachin, Laércio, Machado, Dijanah C., Rusu, Victor H., Aguiar, Juliana P., Rodrigues, Cláudio G.

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 923 KB

english, 2019

25

The Lazy Life of Lipid-Linked Oligosaccharides in All Life Domains

Arantes, Pablo R., Pedebos, Conrado, Polêto, Marcelo D., Pol-Fachin, Laércio, Verli, Hugo

Journal:

Journal of Chemical Information and Modeling

Année:

2019

Fichier:

PDF, 6.38 MB

2019